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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849918.1_cds_XP_016510994.1_23778
CDS Infomation

[gene=LOC107828226] [db_xref=GeneID:107828226] [protein=rhomboid-like protein 11, chloroplastic] [protein_id=XP_016510994.1] [location=complement(join(4985..5167,6076..6138,6283..6449,6546..6586,6743..6828,7157..7278,10672..10864))] [gbkey=CDS]
Sequence

ATGAAACAGCTTCAGCTTCAGCACCATCTGGTGCTCAAACAAAATGTCTATCCTCATAGA
TTCATGCCCATGGCGATGCCACTGTCGACACCATCTCCATTAATTCATCTTCCTAAACTT
CCCCTTAAACTCAAAACTTCACCTATTACCCTAACCACCTCGTCTCGTCTTCTCTGCAAA
TTCAATGATTCCGATATGACCTCACAGCTGGAAATTCTGAAGCCCGAGGGGAAGAAGCCA
GAGAAGCGTGTCAACGGGATATTCTGGATTCTACTTATTAACCTTGGAATATACGTAGCA
GATCATGTCTTCCAGGTTCGGGCAGTAAAAGTATTATACTTTTACCACAATTGGCCTGCT
TGGTACCAGTTTGTGACTGCAACATTCTGTCATTTTAACTGGAACCACCTCTCAAGCAAC
CTTTTCTTTCTGTATATTTTTGGAAAACTCGTTGAAGAGGAGGAAGGAAACTTTGGATTG
TGGCTTTCTTATATAGTAACTGGAGCTGGAGCTAACCTGGTCTCGTGGCTGATTCTGCCA
AGAAATGCTGTCTCTGTTGGTTCATCTGGTGCAGTGTTTGGACTCTTTGCTATTAGTGTA
CTTGTGAAGATGTCTTGGGACTGGAGGAAGATTCTTGAAGTACTTGTATTGGGCCAGTTT
GTTATAGAAAGGGTGATGGAAGCAGCCCAAGCTTCAACAGGATTAGCGGGAGGAATTCGT
GGAGGGTCTGCCCTACAAAATGTTAATCACATTGCACATCTCTCGGGCGCCCTAATTGGT
GTTGCTTTGATATGGCTACTGAGTGGAATTTCTTCGCAAGCCACTGAGCCGGATGCACAT
AACAAAAAAAAGTGA

Peptide Sequence

PEP ID

XP_016510994.1
PEP Infomation

PREDICTED: rhomboid-like protein 11, chloroplastic [Nicotiana tabacum]
Sequence

MKQLQLQHHLVLKQNVYPHRFMPMAMPLSTPSPLIHLPKLPLKLKTSPITLTTSSRLLCK
FNDSDMTSQLEILKPEGKKPEKRVNGIFWILLINLGIYVADHVFQVRAVKVLYFYHNWPA
WYQFVTATFCHFNWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIVTGAGANLVSWLILP
RNAVSVGSSGAVFGLFAISVLVKMSWDWRKILEVLVLGQFVIERVMEAAQASTGLAGGIR
GGSALQNVNHIAHLSGALIGVALIWLLSGISSQATEPDAHNKKK

Transcript Sequence

Gene sequence data has not been registered.